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Accession IconGSE42956

Integration-Free Induced Pluripotent Stem Cells Model Genetic and Neural Developmental Features of Down Syndrome Etiology

Organism Icon Homo sapiens
Sample Icon 54 Downloadable Samples
Technology Badge IconIllumina HumanHT-12 V4.0 expression beadchip

Submitter Supplied Information

Description
Down syndrome (DS) is the most frequent cause of human congenital mental retardation. Cognitive deficits in DS result from perturbations of normal cellular processes both during development and in adult tissues, but the mechanisms underlying DS etiology remain poorly understood. To assess the ability of iPSCs to model DS phenotypes, as a prototypical complex human disease, we generated bona-fide DS and wild-type (WT) non-viral iPSCs by episomal reprogramming. DS iPSCs selectively overexpressed chromosome 21 genes, consistent with gene dosage, which was associated with deregulation of thousands of genes throughout the genome. DS and WT iPSCs were neurally converted at >95% efficiency, and had remarkably similar lineage potency, differentiation kinetics, proliferation and axon extension at early time points. However, at later time points DS cultures showed a two-fold bias towards glial lineages.
PubMed ID
Total Samples
54

Samples

Show of 54 Total Samples
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Accession Code
Title
Sex
Specimen part
Disease
Disease stage
Cell line
Processing Information
Additional Metadata
WT-Fibr2 6
female
fibroblast
normal
normal
crl-1502
WT-Fibr1 8
male
fibroblast
normal
normal
crl-2429
WT1-iPS 5
male
induced pluripotent stem cell
normal
normal
crl-2429
WT-Fibr2 1
female
fibroblast
normal
normal
crl-1502
DS2-iPS 3
male
induced pluripotent stem cell
down's syndrome
down's syndrome
ccl54
WT-Fibr1 7
male
fibroblast
normal
normal
crl-2429
WT4-iPS 1
male
induced pluripotent stem cell
normal
normal
crl-1502
WT4-iPS 3
male
induced pluripotent stem cell
normal
normal
crl-1502
WT2-iPS 3
female
induced pluripotent stem cell
normal
normal
crl-1502
WT3-iPS 1
male
induced pluripotent stem cell
normal
normal
crl-2429
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