github link
Accession IconGSE44266

Deregulation of microRNAs by HIV-1 Vpr protein leads to the development of neurocognitive disorders.

Organism Icon Homo sapiens
Sample Icon 7 Downloadable Samples
Technology Badge Icon Affymetrix Human Gene 1.0 ST Array (hugene10st), Affymetrix Human Gene 1.1 ST Array (hugene11st)

Submitter Supplied Information

Description
Studies have shown that HIV-infected patients develop neurocognitive disorders characterized by neuronal dysfunction. The lack of productive infection of neurons by HIV suggests that viral and cellular proteins, with neurotoxic activities, released from HIV-1-infected target cells can cause this neuronal deregulation. The viral protein R (Vpr), a protein encoded by HIV-1, has been shown to alter the expression of various important cytokines and inflammatory proteins in infected and uninfected cells; however the mechanisms involved remain unclear. Using a human neuronal cell line, we found that Vpr can be taken up by neurons causing: (i) deregulation of calcium homeostasis, (ii) endoplasmic reticulum-calcium release, (iii) activation of the oxidative stress pathway, (iv) mitochondrial dysfunction and v- synaptic retraction. In search for the cellular factors involved, we performed microRNAs and gene array assays using human neurons (primary cultures or cell line, SH-SY5Y) that we treated with recombinant Vpr proteins. Interestingly, Vpr deregulates the levels of several microRNAs (e.g. miR-34a) and their target genes (e.g. CREB), which could lead to neuronal dysfunctions. Therefore, we conclude that Vpr plays a major role in neuronal dysfunction through deregulating microRNAs and their target genes, a phenomenon that could lead to the development of neurocognitive disorders.
PubMed ID
Total Samples
28
Submitter’s Institution

Samples

Show of 28 Total Samples
Filter
Add/Remove
Accession Code
Title
Specimen part
Cell line
Treatment
Processing Information
Additional Metadata
HIV-1 Vpr (1) [mRNA]
NA
NA
vpr
Differentiated SH-5Y cells_Mock-(2)[mRNA]
NA
differentiated sh-sy5y neuronal cell line
NA
Differentiated SH-5Y cells treated with HIV-1 Vpr (2)[mRNA]
NA
differentiated sh-sy5y neuronal cell line
NA
HIV-1 Vpr (2) [mRNA]
NA
NA
vpr
Differentiated SH-5Y cells_Mock-(1)[mRNA]
NA
differentiated sh-sy5y neuronal cell line
NA
Differentiated SH-5Y cells treated with HIV-1 Vpr (1)[mRNA]
NA
differentiated sh-sy5y neuronal cell line
NA
Control (1)_HN [mRNA]
NA
NA
control
Sample not processed
Learn more
HIV-1 Vpr SH-SY5Y (miRNA)
NA
sh-sy5y
10 pg/ml of vpr protein
NA
Sample not processed
Learn more
Control M2 [miRNA]
primary human neurons
NA
NA
NA
Sample not processed
Learn more
Differentiated SH-5Y cells (2) [mRNA]
NA
neuronal cell line sh-sy5y
mock
NA
Loading...