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accession-icon GSE72829
Diagnosis of childhood bacterial and viral infection using host RNA expression
  • organism-icon Homo sapiens
  • sample-icon 202 Downloadable Samples
  • Technology Badge IconIllumina HumanHT-12 V4.0 expression beadchip, Illumina HumanRef-8 v3.0 expression beadchip

Description

This SuperSeries is composed of the SubSeries listed below.

Publication Title

Diagnostic Test Accuracy of a 2-Transcript Host RNA Signature for Discriminating Bacterial vs Viral Infection in Febrile Children.

Sample Metadata Fields

Sex, Specimen part, Disease, Disease stage

View Samples
accession-icon GSE72809
Diagnosis of childhood bacterial and viral infection using host RNA expression [Discovery set]
  • organism-icon Homo sapiens
  • sample-icon 39 Downloadable Samples
  • Technology Badge IconIllumina HumanHT-12 V4.0 expression beadchip, Illumina HumanRef-8 v3.0 expression beadchip

Description

Genome-wide analysis of transcriptional profiles in children <17 years of age with bacterial or viral infections or with clinical features suggestive of infection.

Publication Title

Diagnostic Test Accuracy of a 2-Transcript Host RNA Signature for Discriminating Bacterial vs Viral Infection in Febrile Children.

Sample Metadata Fields

Sex, Specimen part

View Samples
accession-icon GSE72810
Diagnosis of childhood bacterial and viral infection using host RNA expression [validation set]
  • organism-icon Homo sapiens
  • sample-icon 146 Downloadable Samples
  • Technology Badge IconIllumina HumanRef-8 v3.0 expression beadchip

Description

Genome-wide analysis of transcriptional profiles in children <17 years of age with bacterial or viral infections or with clinical features suggestive of infection.

Publication Title

Diagnostic Test Accuracy of a 2-Transcript Host RNA Signature for Discriminating Bacterial vs Viral Infection in Febrile Children.

Sample Metadata Fields

Sex, Specimen part

View Samples
accession-icon GSE80412
Diagnosis of childhood bacterial and viral infection using host RNA expression - Inflammatory validation cohort
  • organism-icon Homo sapiens
  • sample-icon 1 Downloadable Sample
  • Technology Badge IconIllumina HumanRef-8 v3.0 expression beadchip, Illumina HumanHT-12 V4.0 expression beadchip

Description

Genome-wide analysis of transcriptional profiles in children <17 years of age with bacterial or viral infections or with clinical features suggestive of infection.

Publication Title

Diagnostic Test Accuracy of a 2-Transcript Host RNA Signature for Discriminating Bacterial vs Viral Infection in Febrile Children.

Sample Metadata Fields

Sex, Specimen part

View Samples
accession-icon GSE80496
Diagnosis of childhood bacterial and viral infection using host RNA expression - Meningococcal validation cohort
  • organism-icon Homo sapiens
  • sample-icon 16 Downloadable Samples
  • Technology Badge IconIllumina HumanRef-8 v3.0 expression beadchip

Description

Genome-wide analysis of transcriptional profiles in children <17 years of age with bacterial or viral infections or with clinical features suggestive of infection.

Publication Title

Diagnostic Test Accuracy of a 2-Transcript Host RNA Signature for Discriminating Bacterial vs Viral Infection in Febrile Children.

Sample Metadata Fields

Sex, Disease, Disease stage

View Samples
accession-icon GSE73464
Diagnosis of Kawasaki Disease in children using host RNA expression
  • organism-icon Homo sapiens
  • sample-icon 839 Downloadable Samples
  • Technology Badge IconIllumina HumanHT-12 V4.0 expression beadchip, Illumina HumanHT-12 V3.0 expression beadchip

Description

This SuperSeries is composed of the SubSeries listed below.

Publication Title

Diagnosis of Kawasaki Disease Using a Minimal Whole-Blood Gene Expression Signature.

Sample Metadata Fields

Sex

View Samples
accession-icon GSE73461
Diagnosis of Kawasaki Disease in children using host RNA expression [Discovery_Dataset]
  • organism-icon Homo sapiens
  • sample-icon 459 Downloadable Samples
  • Technology Badge IconIllumina HumanHT-12 V3.0 expression beadchip, Illumina HumanHT-12 V4.0 expression beadchip

Description

Genome-wide analysis of transcriptional profiles in children <17 years of age with inflammatory diseases, bacterial or viral infections or with clinical features suggestive of infection.

Publication Title

Diagnosis of Kawasaki Disease Using a Minimal Whole-Blood Gene Expression Signature.

Sample Metadata Fields

Sex

View Samples
accession-icon GSE73463
Diagnosis of Kawasaki Disease in children using host RNA expression [Validation_HT12V4_Dataset]
  • organism-icon Homo sapiens
  • sample-icon 233 Downloadable Samples
  • Technology Badge IconIllumina HumanHT-12 V3.0 expression beadchip, Illumina HumanHT-12 V4.0 expression beadchip

Description

Genome-wide analysis of transcriptional profiles in children <17 years of age with inflammatory diseases, bacterial or viral infections or with clinical features suggestive of infection.

Publication Title

Diagnosis of Kawasaki Disease Using a Minimal Whole-Blood Gene Expression Signature.

Sample Metadata Fields

Sex

View Samples
accession-icon GSE73462
Diagnosis of Kawasaki Disease in children using host RNA expression [Validation_HT12V3_Dataset]
  • organism-icon Homo sapiens
  • sample-icon 147 Downloadable Samples
  • Technology Badge IconIllumina HumanHT-12 V3.0 expression beadchip

Description

Genome-wide analysis of transcriptional profiles in children <17 years of age with inflammatory diseases, bacterial or viral infections or with clinical features suggestive of infection.

Publication Title

Diagnosis of Kawasaki Disease Using a Minimal Whole-Blood Gene Expression Signature.

Sample Metadata Fields

Sex

View Samples
accession-icon GSE24986
Response of A549 cells treated with Aspergillus fumigatus
  • organism-icon Homo sapiens
  • sample-icon 24 Downloadable Samples
  • Technology Badge Icon Affymetrix Human Genome U133A 2.0 Array (hgu133a2), Affymetrix Human Gene 1.0 ST Array (hugene10st)

Description

This SuperSeries is composed of the SubSeries listed below.

Publication Title

PrtT-regulated proteins secreted by Aspergillus fumigatus activate MAPK signaling in exposed A549 lung cells leading to necrotic cell death.

Sample Metadata Fields

Specimen part, Cell line, Treatment

View Samples
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refine.bio is a repository of uniformly processed and normalized, ready-to-use transcriptome data from publicly available sources. refine.bio is a project of the Childhood Cancer Data Lab (CCDL)

fund-icon Fund the CCDL

Developed by the Childhood Cancer Data Lab

Powered by Alex's Lemonade Stand Foundation

Cite refine.bio

Casey S. Greene, Dongbo Hu, Richard W. W. Jones, Stephanie Liu, David S. Mejia, Rob Patro, Stephen R. Piccolo, Ariel Rodriguez Romero, Hirak Sarkar, Candace L. Savonen, Jaclyn N. Taroni, William E. Vauclain, Deepashree Venkatesh Prasad, Kurt G. Wheeler. refine.bio: a resource of uniformly processed publicly available gene expression datasets.
URL: https://www.refine.bio

Note that the contributor list is in alphabetical order as we prepare a manuscript for submission.

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