Filters
Technology
Platform
SRP108540
Glycine max
35 Downloadable Samples
Illumina HiSeq 2000
Description
Transcriptome sequencing to identify differentially expressed transcripts in roots of iron deficiency chlorosis tolerant line U06-105454 and iron deficiency chlorosis sensitive line U06-625083 with low iron and alkaline treatments
Publication Title
No associated publication
Sample Metadata Fields
Age, Specimen part, Treatment
View Samples- Zea mays
- 17 Downloadable Samples
- Illumina HiSeq 2000
Description
Our study revealed photoperiod influenced on not only flowering not only stress responses under long-day conditions and ZmCCT and ZmCCA1 were the key functional links between the circadian clock and adversity stress tolerance. Establishment of the molecular link reveals a new interface between the plant phtoperiod and adversity stress.
Publication Title
Dual functions of the ZmCCT-associated quantitative trait locus in flowering and stress responses under long-day conditions.
Sample Metadata Fields
Specimen part
View Samples- Arabidopsis thaliana
- 7 Downloadable Samples
Affymetrix Arabidopsis ATH1 Genome Array (ath1121501)
Description
RNA prepared from specialized replum cells within siliques provided targets for profiling the Arabidopsis genome during replum cell development.
Publication Title
Laser capture microdissection of plant cells from tape-transferred paraffin sections promotes recovery of structurally intact RNA for global gene profiling.
Sample Metadata Fields
Specimen part
View Samples- Arabidopsis thaliana
- 8 Downloadable Samples
- Illumina HiSeq 2500
Description
It has been reported that IRE1-bZIP60 pathway is conserved for the signal transduction and gene regulation in response to ER stress including high temperature among human, yeast, Arabidopsis, rice and maize. However, the information of their counterparts in wheat is limited and, especially, the biological relevance of the equivalent pathway contributing to heat tolerance is still ambiguous. In present study, we identified heat stress-induced wheat bZIP60 and investigated its splicing pattern depending on IRE1.
Publication Title
No associated publication
Sample Metadata Fields
Specimen part, Treatment
View Samples- Zea mays
- 1 Downloadable Sample
- Illumina HiSeq 2500
Description
In this study, the immature embyros of inbred line Z31and hybrid HiII were heated in 45 ?C water bath for 2 min, and then infected with Agrobacterium suspension for 5 min. After infection, the immature embryos were transferred onto CO-medium with or without 100 mg L-1 cysteine which is freshly prepared and filter-sterilized. After culturing for 3 days at 25 ?C under dark conditions, the immature embryos were collected, and stored at -70 ?C for RNA extraction. The genes up-regulated and down regulated both in Z31 and HiII were analyzed, and elucidate the role of cysteine in improving the efficiency of Agrobacterium infection of maize immature embryo, and provide important information for the improvement of the maize transformation.
Publication Title
No associated publication
Sample Metadata Fields
Specimen part
View Samples- Zea mays
- 1 Downloadable Sample
- Illumina HiSeq 2000
Description
In this study, the immature embyros of inbred line Z31and hybrid HiII were heated in 45 C water bath for 2 min, and then infected with Agrobacterium suspension for 5 min. After infection, the immature embryos were transferred onto CO-medium with or without 100 mg L-1 cysteine which is freshly prepared and filter-sterilized. After culturing for 3 days at 25 C under dark conditions, the immature embryos were collected, and stored at -70 C for RNA extraction. The genes up-regulated and down regulated both in Z31 and HiII were analyzed, and elucidate the role of cysteine in improving the efficiency of Agrobacterium infection of maize immature embryo, and provide important information for the improvement of the maize transformation.
Publication Title
No associated publication
Sample Metadata Fields
Specimen part
View Samples- Zea mays
- 1 Downloadable Sample
- Illumina HiSeq 2000
Description
In this study, the immature embyros of inbred line Z31and hybrid HiII were heated in 45 C water bath for 2 min, and then infected with Agrobacterium suspension for 5 min. After infection, the immature embryos were transferred onto CO-medium with or without 100 mg L-1 cysteine which is freshly prepared and filter-sterilized. After culturing for 3 days at 25 C under dark conditions, the immature embryos were collected, and stored at -70 C for RNA extraction. The genes up-regulated and down regulated both in Z31 and HiII were analyzed, and elucidate the role of cysteine in improving the efficiency of Agrobacterium infection of maize immature embryo, and provide important information for the improvement of the maize transformation.
Publication Title
No associated publication
Sample Metadata Fields
Specimen part
View Samples- Zea mays
- 1 Downloadable Sample
- Illumina HiSeq 2000
Description
In this study, the immature embyros of inbred line Z31and hybrid HiII were heated in 45 C water bath for 2 min, and then infected with Agrobacterium suspension for 5 min. After infection, the immature embryos were transferred onto CO-medium with or without 100 mg L-1 cysteine which is freshly prepared and filter-sterilized. After culturing for 3 days at 25 C under dark conditions, the immature embryos were collected, and stored at -70 C for RNA extraction. The genes up-regulated and down regulated both in Z31 and HiII were analyzed, and elucidate the role of cysteine in improving the efficiency of Agrobacterium infection of maize immature embryo, and provide important information for the improvement of the maize transformation.
Publication Title
No associated publication
Sample Metadata Fields
Specimen part
View Samples- Zea mays
- 1 Downloadable Sample
- Illumina HiSeq 2000
Description
In this study, the immature embyros of inbred line Z31and hybrid HiII were heated in 45 C water bath for 2 min, and then infected with Agrobacterium suspension for 5 min. After infection, the immature embryos were transferred onto CO-medium with or without 100 mg L-1 cysteine which is freshly prepared and filter-sterilized. After culturing for 3 days at 25 C under dark conditions, the immature embryos were collected, and stored at -70 C for RNA extraction. The genes up-regulated and down regulated both in Z31 and HiII were analyzed, and elucidate the role of cysteine in improving the efficiency of Agrobacterium infection of maize immature embryo, and provide important information for the improvement of the maize transformation.
Publication Title
No associated publication
Sample Metadata Fields
Specimen part
View Samples- Zea mays
- 1 Downloadable Sample
- Illumina HiSeq 2000
Description
In this study, the immature embyros of inbred line Z31and hybrid HiII were heated in 45 C water bath for 2 min, and then infected with Agrobacterium suspension for 5 min. After infection, the immature embryos were transferred onto CO-medium with or without 100 mg L-1 cysteine which is freshly prepared and filter-sterilized. After culturing for 3 days at 25 C under dark conditions, the immature embryos were collected, and stored at -70 C for RNA extraction. The genes up-regulated and down regulated both in Z31 and HiII were analyzed, and elucidate the role of cysteine in improving the efficiency of Agrobacterium infection of maize immature embryo, and provide important information for the improvement of the maize transformation.
Publication Title
No associated publication
Sample Metadata Fields
Specimen part
View Samples