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accession-icon GSE13379
Application of a translational profiling approach for the comparative analysis of CNS cell types.
  • organism-icon Mus musculus
  • sample-icon 107 Downloadable Samples
  • Technology Badge Icon Affymetrix Mouse Genome 430 2.0 Array (mouse4302)

Description

Comparative analysis can provide important insights into complex biological systems. As demonstrated in the accompanying paper, Translating Ribosome Affinity Purification (TRAP), permits comprehensive studies of translated mRNAs in genetically defined cell populations following physiological perturbations.

Publication Title

Application of a translational profiling approach for the comparative analysis of CNS cell types.

Sample Metadata Fields

No sample metadata fields

View Samples
accession-icon GSE13394
A translational profiling approach for the molecular characterization of CNS cell types
  • organism-icon Mus musculus
  • sample-icon 62 Downloadable Samples
  • Technology Badge Icon Affymetrix Mouse Genome 430 2.0 Array (mouse4302)

Description

The cellular heterogeneity of the brain confounds efforts to elucidate the biological properties of distinct neuronal populations.

Publication Title

No associated publication

Sample Metadata Fields

No sample metadata fields

View Samples
accession-icon GSE13387
Comparative analysis of Drd1+ Medium Spiny Neurons, Drd2+ Medium Spiny Neurons, Motor Neurons, and Purkinje Neurons
  • organism-icon Mus musculus
  • sample-icon 23 Downloadable Samples
  • Technology Badge Icon Affymetrix Mouse Genome 430 2.0 Array (mouse4302)

Description

The cellular heterogeneity of the brain confounds efforts to elucidate the biological properties of distinct neuronal populations.

Publication Title

A translational profiling approach for the molecular characterization of CNS cell types.

Sample Metadata Fields

No sample metadata fields

View Samples
accession-icon GSE13386
Comparative analysis of Drd1+ Medium Spiny Neurons, Drd2+ Medium Spiny Neurons, cocaine treatment
  • organism-icon Mus musculus
  • sample-icon 24 Downloadable Samples
  • Technology Badge Icon Affymetrix Mouse Genome 430 2.0 Array (mouse4302)

Description

The cellular heterogeneity of the brain confounds efforts to elucidate the biological properties of distinct neuronal populations.

Publication Title

No associated publication

Sample Metadata Fields

No sample metadata fields

View Samples
accession-icon GSE13385
Comparative analysis of Drd1+ Medium Spiny Neurons, Drd2+ Medium Spiny Neurons and whole brain
  • organism-icon Mus musculus
  • sample-icon 9 Downloadable Samples
  • Technology Badge Icon Affymetrix Mouse Genome 430 2.0 Array (mouse4302)

Description

The cellular heterogeneity of the brain confounds efforts to elucidate the biological properties of distinct neuronal populations.

Publication Title

A translational profiling approach for the molecular characterization of CNS cell types.

Sample Metadata Fields

No sample metadata fields

View Samples
accession-icon GSE13384
Comparative analysis of Drd1+ Medium Spiny Neurons and Drd2+ Medium Spiny Neurons
  • organism-icon Mus musculus
  • sample-icon 6 Downloadable Samples
  • Technology Badge Icon Affymetrix Mouse Genome 430 2.0 Array (mouse4302)

Description

The cellular heterogeneity of the brain confounds efforts to elucidate the biological properties of distinct neuronal populations.

Publication Title

A translational profiling approach for the molecular characterization of CNS cell types.

Sample Metadata Fields

No sample metadata fields

View Samples
accession-icon GSE33471
Paracrine TGF Signaling Counterbalances BMP-Mediated Repression in Hair Follicle Stem Cell Activation
  • organism-icon Mus musculus
  • sample-icon 12 Downloadable Samples
  • Technology Badge Icon Affymetrix Mouse Genome 430 2.0 Array (mouse4302)

Description

Hair follicle (HF) regeneration begins when communication between quiescent epithelial stem cells (SCs) and underlying mesenchymal dermal papillae (DP) generates sufficient activating cues to overcome repressive BMP signals from surrounding niche cells. We uncovered a hitherto unrecognized DP transmitter, TGF2, which activates Smad2/3 transiently in HFSCs concomitant with entry into tissue regeneration.

Publication Title

Paracrine TGF-β signaling counterbalances BMP-mediated repression in hair follicle stem cell activation.

Sample Metadata Fields

Sex, Specimen part

View Samples
accession-icon GSE16067
Gene expression analysis in control and HIF-2 alpha deficient murine lung endothelial cells under hypoxia
  • organism-icon Mus musculus
  • sample-icon 6 Downloadable Samples
  • Technology Badge Icon Affymetrix Mouse Genome 430 2.0 Array (mouse4302)

Description

Journal : Blood. 2009 Jul 9;114(2):469-77. Epub 2009 May 13.

Publication Title

Endothelial deletion of hypoxia-inducible factor-2alpha (HIF-2alpha) alters vascular function and tumor angiogenesis.

Sample Metadata Fields

Specimen part

View Samples
accession-icon GSE24826
Histone H3 lysine 9 di-methylation as an epigenetic signature of the interferon response
  • organism-icon Mus musculus
  • sample-icon 20 Downloadable Samples
  • Technology Badge IconIllumina MouseRef-8 v2.0 expression beadchip

Description

This SuperSeries is composed of the SubSeries listed below.

Publication Title

Histone H3 lysine 9 di-methylation as an epigenetic signature of the interferon response.

Sample Metadata Fields

Specimen part, Treatment

View Samples
accession-icon GSE60028
Molecular profiling of contact dermatitis skin identifies allergen-dependent differences in immune response
  • organism-icon Homo sapiens
  • sample-icon 43 Downloadable Samples
  • Technology Badge Icon Affymetrix Human Genome U133 Plus 2.0 Array (hgu133plus2)

Description

Different allergens induce different immune responses

Publication Title

Molecular profiling of contact dermatitis skin identifies allergen-dependent differences in immune response.

Sample Metadata Fields

Sex, Subject

View Samples
...

refine.bio is a repository of uniformly processed and normalized, ready-to-use transcriptome data from publicly available sources. refine.bio is a project of the Childhood Cancer Data Lab (CCDL)

fund-icon Fund the CCDL

Developed by the Childhood Cancer Data Lab

Powered by Alex's Lemonade Stand Foundation

Cite refine.bio

Casey S. Greene, Dongbo Hu, Richard W. W. Jones, Stephanie Liu, David S. Mejia, Rob Patro, Stephen R. Piccolo, Ariel Rodriguez Romero, Hirak Sarkar, Candace L. Savonen, Jaclyn N. Taroni, William E. Vauclain, Deepashree Venkatesh Prasad, Kurt G. Wheeler. refine.bio: a resource of uniformly processed publicly available gene expression datasets.
URL: https://www.refine.bio

Note that the contributor list is in alphabetical order as we prepare a manuscript for submission.

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